Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.3■□□□□ 0.68
RtcbQ99LF4 Gm5779-201ENSMUST00000218467 910 ntBASIC19.3■□□□□ 0.68
RtcbQ99LF4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm10154-201ENSMUST00000084445 354 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RtcbQ99LF4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.29■□□□□ 0.68
RtcbQ99LF4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RtcbQ99LF4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Gm8318-201ENSMUST00000182954 872 ntBASIC19.28■□□□□ 0.68
RtcbQ99LF4 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.28■□□□□ 0.68
RtcbQ99LF4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
RtcbQ99LF4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RtcbQ99LF4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RtcbQ99LF4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.27■□□□□ 0.67
RtcbQ99LF4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Gm43438-201ENSMUST00000198133 379 ntBASIC19.26■□□□□ 0.67
RtcbQ99LF4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RtcbQ99LF4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.25■□□□□ 0.67
RtcbQ99LF4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Gm5866-201ENSMUST00000177881 973 ntBASIC19.25■□□□□ 0.67
RtcbQ99LF4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms