Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gm8344-201ENSMUST00000119813 856 ntBASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cstf1Q99LC2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cstf1Q99LC2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Gm15427-201ENSMUST00000117288 531 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms