Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm45605-201ENSMUST00000210265 4269 ntBASIC14□□□□□ -0.17
Thumpd1Q99J36 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm11839-201ENSMUST00000120647 1953 ntBASIC14□□□□□ -0.17
Thumpd1Q99J36 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm10052-201ENSMUST00000168019 960 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Mir6404-201ENSMUST00000183699 94 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm8520-201ENSMUST00000186517 868 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm44430-201ENSMUST00000203376 995 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm7729-201ENSMUST00000050143 801 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Thumpd1Q99J36 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thumpd1Q99J36 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thumpd1Q99J36 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms