Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Gm4459-201ENSMUST00000118750 468 ntBASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Gm7506-201ENSMUST00000207758 815 ntBASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb1Q91Y08 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Ank2-226ENSMUST00000189368 339 ntBASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gm18622-201ENSMUST00000219361 595 ntBASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb1Q91Y08 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb1Q91Y08 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb1Q91Y08 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms