Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm37751-201ENSMUST00000192440 1198 ntBASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm5708-201ENSMUST00000196289 886 ntBASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb20Q91XZ9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm10060-201ENSMUST00000212002 111 ntBASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb20Q91XZ9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms