Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Gm27494-201ENSMUST00000184735 189 ntBASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb5Q91XZ5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb5Q91XZ5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Pcdhb5Q91XZ5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Mir1895-201ENSMUST00000122615 79 ntBASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb5Q91XZ5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb5Q91XZ5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gm15427-201ENSMUST00000117288 531 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gm15920-201ENSMUST00000118998 402 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gm10576-201ENSMUST00000191927 825 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gm8396-201ENSMUST00000057361 823 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb5Q91XZ5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms