Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Gm19164-201ENSMUST00000210667 640 ntBASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb6Q91XZ4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb6Q91XZ4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb6Q91XZ4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb6Q91XZ4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb6Q91XZ4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb6Q91XZ4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Gm14722-201ENSMUST00000118943 689 ntBASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Gm8344-201ENSMUST00000119813 856 ntBASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb6Q91XZ4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Gm8097-201ENSMUST00000117903 829 ntBASIC16.06■□□□□ 0.16
Pcdhb6Q91XZ4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms