Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga9Q91XX9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga9Q91XX9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.46■□□□□ 0.07
Pcdhga9Q91XX9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga9Q91XX9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga9Q91XX9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga9Q91XX9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhga9Q91XX9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga9Q91XX9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga9Q91XX9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms