Protein–RNA interactions for Protein: Q91VB4

Hps3, Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

Predictions only

Length 1,002 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3Q91VB4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.7■□□□□ 0.42
Hps3Q91VB4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Gm7367-201ENSMUST00000057611 492 ntBASIC17.7■□□□□ 0.42
Hps3Q91VB4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps3Q91VB4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Mir3081-201ENSMUST00000175305 84 ntBASIC17.69■□□□□ 0.42
Hps3Q91VB4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps3Q91VB4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.68■□□□□ 0.42
Hps3Q91VB4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.68■□□□□ 0.42
Hps3Q91VB4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps3Q91VB4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.67■□□□□ 0.42
Hps3Q91VB4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.67■□□□□ 0.42
Hps3Q91VB4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps3Q91VB4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps3Q91VB4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms