Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tram1Q91V04 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.52□□□□□ -0.25
Tram1Q91V04 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Tram1Q91V04 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Gm11539-201ENSMUST00000119837 557 ntBASIC13.51□□□□□ -0.25
Tram1Q91V04 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tram1Q91V04 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Tram1Q91V04 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tram1Q91V04 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tram1Q91V04 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Gm37179-201ENSMUST00000194862 823 ntBASIC13.5□□□□□ -0.25
Tram1Q91V04 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tram1Q91V04 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.5□□□□□ -0.25
Tram1Q91V04 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.49□□□□□ -0.25
Tram1Q91V04 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tram1Q91V04 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tram1Q91V04 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Tram1Q91V04 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.48□□□□□ -0.25
Tram1Q91V04 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Trmt13-210ENSMUST00000198454 880 ntBASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.48□□□□□ -0.25
Tram1Q91V04 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms