Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
H1fooQ8VIK3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
H1fooQ8VIK3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Gm6257-201ENSMUST00000163864 910 ntBASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H1fooQ8VIK3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gm13312-201ENSMUST00000119631 718 ntBASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H1fooQ8VIK3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms