Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Mir3547-201ENSMUST00000175461 88 ntBASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Gm19164-201ENSMUST00000210667 640 ntBASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Mir8102-201ENSMUST00000184148 139 ntBASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cspg4Q8VHY0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm12008-201ENSMUST00000117791 755 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22065-201ENSMUST00000103753 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22066-201ENSMUST00000103761 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24932-201ENSMUST00000103763 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24115-201ENSMUST00000103799 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22190-201ENSMUST00000103827 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22191-201ENSMUST00000103831 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24721-201ENSMUST00000103849 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm28018-201ENSMUST00000103869 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm26399-201ENSMUST00000103937 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm14719-201ENSMUST00000121891 340 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25349-201ENSMUST00000177728 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm23616-201ENSMUST00000177797 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25871-201ENSMUST00000177816 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24752-201ENSMUST00000178240 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24496-201ENSMUST00000178287 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25649-201ENSMUST00000178476 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25548-201ENSMUST00000178681 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm23147-201ENSMUST00000178841 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm26095-201ENSMUST00000179270 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22171-201ENSMUST00000179283 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm23936-201ENSMUST00000179354 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm22619-201ENSMUST00000179516 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25255-201ENSMUST00000179579 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24755-201ENSMUST00000179691 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm26506-201ENSMUST00000179692 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm25086-201ENSMUST00000179931 110 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms