Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Gm13312-201ENSMUST00000119631 718 ntBASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Gm6659-201ENSMUST00000174752 547 ntBASIC15.72■□□□□ 0.11
Vps39Q8R5L3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps39Q8R5L3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps39Q8R5L3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps39Q8R5L3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps39Q8R5L3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Gm15794-201ENSMUST00000120182 631 ntBASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps39Q8R5L3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms