Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nup58Q8R332 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup58Q8R332 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup58Q8R332 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.81■□□□□ 0.28
Nup58Q8R332 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup58Q8R332 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.81■□□□□ 0.28
Nup58Q8R332 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup58Q8R332 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.81■□□□□ 0.28
Nup58Q8R332 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup58Q8R332 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Gm44430-201ENSMUST00000203376 995 ntBASIC16.8■□□□□ 0.28
Nup58Q8R332 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.8■□□□□ 0.28
Nup58Q8R332 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup58Q8R332 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup58Q8R332 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Gm11950-201ENSMUST00000121615 838 ntBASIC16.79■□□□□ 0.28
Nup58Q8R332 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Gm10052-201ENSMUST00000168019 960 ntBASIC16.79■□□□□ 0.28
Nup58Q8R332 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Gm7729-201ENSMUST00000050143 801 ntBASIC16.79■□□□□ 0.28
Nup58Q8R332 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nup58Q8R332 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup58Q8R332 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nup58Q8R332 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.78■□□□□ 0.28
Nup58Q8R332 Gm6623-201ENSMUST00000173570 544 ntBASIC16.78■□□□□ 0.28
Nup58Q8R332 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.78■□□□□ 0.28
Nup58Q8R332 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.78■□□□□ 0.28
Nup58Q8R332 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms