Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 Gm2756-201ENSMUST00000195851 400 ntBASIC18■□□□□ 0.47
Pspc1Q8R326 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18■□□□□ 0.47
Pspc1Q8R326 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pspc1Q8R326 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pspc1Q8R326 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pspc1Q8R326 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.99■□□□□ 0.47
Pspc1Q8R326 Gm6736-201ENSMUST00000166583 948 ntBASIC17.99■□□□□ 0.47
Pspc1Q8R326 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pspc1Q8R326 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Gm4995-201ENSMUST00000117247 432 ntBASIC17.98■□□□□ 0.47
Pspc1Q8R326 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pspc1Q8R326 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Gm4899-201ENSMUST00000178708 719 ntBASIC17.97■□□□□ 0.47
Pspc1Q8R326 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pspc1Q8R326 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.96■□□□□ 0.47
Pspc1Q8R326 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pspc1Q8R326 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pspc1Q8R326 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms