Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Thap2-203ENSMUST00000218989 527 ntBASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp7Q8R1T1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Gm45612-201ENSMUST00000211320 160 ntBASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp7Q8R1T1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Chmp7Q8R1T1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp7Q8R1T1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms