Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nudcd3Q8R1N4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nudcd3Q8R1N4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nudcd3Q8R1N4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nudcd3Q8R1N4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Gm26039-201ENSMUST00000158152 144 ntBASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nudcd3Q8R1N4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nudcd3Q8R1N4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Gm5417-201ENSMUST00000079706 384 ntBASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms