Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vopp1Q8R1C3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Gm43474-201ENSMUST00000196415 774 ntBASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vopp1Q8R1C3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vopp1Q8R1C3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 App-207ENSMUST00000227737 2827 ntBASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vopp1Q8R1C3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Gm15920-201ENSMUST00000118998 402 ntBASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vopp1Q8R1C3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vopp1Q8R1C3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vopp1Q8R1C3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vopp1Q8R1C3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms