Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Gm12644-201ENSMUST00000119935 606 ntBASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Gm21362-201ENSMUST00000194272 928 ntBASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atf7Q8R0S1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf7Q8R0S1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Atf7Q8R0S1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Gm8655-201ENSMUST00000221159 852 ntBASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf7Q8R0S1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms