Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.81■□□□□ 0.12
Clip4Q8CI96 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Gm17971-201ENSMUST00000190239 806 ntBASIC15.81■□□□□ 0.12
Clip4Q8CI96 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.81■□□□□ 0.12
Clip4Q8CI96 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clip4Q8CI96 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.8■□□□□ 0.12
Clip4Q8CI96 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clip4Q8CI96 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clip4Q8CI96 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms