Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm38225-201ENSMUST00000194001 393 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm9063-201ENSMUST00000223299 582 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h3Q8CHP0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Gm2810-201ENSMUST00000118681 990 ntBASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Gm11543-201ENSMUST00000120758 370 ntBASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3h3Q8CHP0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm12859-201ENSMUST00000117834 427 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm18737-201ENSMUST00000173594 937 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm25144-201ENSMUST00000179561 110 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm25352-201ENSMUST00000179815 110 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Gm27838-201ENSMUST00000184829 128 ntBASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Zc3h3Q8CHP0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gm11478-201ENSMUST00000117851 599 ntBASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gm6745-201ENSMUST00000199216 526 ntBASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gm45384-201ENSMUST00000210451 277 ntBASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Gm9899-201ENSMUST00000065519 555 ntBASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3h3Q8CHP0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zc3h3Q8CHP0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
Zc3h3Q8CHP0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms