Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zswim3Q8CFL8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zswim3Q8CFL8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.13■□□□□ 0.33
Zswim3Q8CFL8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zswim3Q8CFL8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.13■□□□□ 0.33
Zswim3Q8CFL8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Gm12008-201ENSMUST00000117791 755 ntBASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Gm14127-201ENSMUST00000117906 678 ntBASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Gm16198-201ENSMUST00000118766 670 ntBASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zswim3Q8CFL8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Gm15693-201ENSMUST00000120470 637 ntBASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zswim3Q8CFL8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Gm27618-201ENSMUST00000183671 60 ntBASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zswim3Q8CFL8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Mir8102-201ENSMUST00000184148 139 ntBASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms