Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcpip1Q8CDG3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcpip1Q8CDG3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vcpip1Q8CDG3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vcpip1Q8CDG3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vcpip1Q8CDG3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcpip1Q8CDG3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms