Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf31Q8CCF0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf31Q8CCF0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf31Q8CCF0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms