Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Gm8344-201ENSMUST00000119813 856 ntBASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc60Q8C4J0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Gm25990-201ENSMUST00000102440 86 ntBASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Gm27646-201ENSMUST00000183989 110 ntBASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Gm28659-201ENSMUST00000188013 759 ntBASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc60Q8C4J0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Ccdc60Q8C4J0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Gm19164-201ENSMUST00000210667 640 ntBASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.95■□□□□ 0.78
Ccdc60Q8C4J0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Gm7862-201ENSMUST00000121461 292 ntBASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc60Q8C4J0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc60Q8C4J0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms