Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Gm21362-201ENSMUST00000194272 928 ntBASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Gm18622-201ENSMUST00000219361 595 ntBASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.17■□□□□ 0.18
Trub1Q8C0D0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trub1Q8C0D0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trub1Q8C0D0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Gm12644-201ENSMUST00000119935 606 ntBASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trub1Q8C0D0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
Trub1Q8C0D0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trub1Q8C0D0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms