Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm10499-201ENSMUST00000174094 934 ntBASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm45167-201ENSMUST00000208007 322 ntBASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Gm8515-201ENSMUST00000194852 576 ntBASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd9Q8BYH8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd9Q8BYH8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.27□□□□□ -0.45
Chd9Q8BYH8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm45668-201ENSMUST00000211271 493 ntBASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd9Q8BYH8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm15693-201ENSMUST00000120470 637 ntBASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm42693-201ENSMUST00000196779 631 ntBASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms