Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4Q8BQZ5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4Q8BQZ5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4Q8BQZ5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm27741-201ENSMUST00000185060 237 ntBASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4Q8BQZ5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms