Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gm36967-201ENSMUST00000193814 266 ntBASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ckap4Q8BMK4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ckap4Q8BMK4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms