Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm17150-201ENSMUST00000165577 381 ntBASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm16215-201ENSMUST00000161990 637 ntBASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smg1Q8BKX6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smg1Q8BKX6 Gm23984-201ENSMUST00000157139 203 ntBASIC13.15□□□□□ -0.31
Smg1Q8BKX6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.15□□□□□ -0.31
Smg1Q8BKX6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm27680-201ENSMUST00000184192 160 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm24694-201ENSMUST00000180054 110 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Gm27663-201ENSMUST00000184839 110 ntBASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smg1Q8BKX6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gm18489-201ENSMUST00000172565 551 ntBASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Mir3102-201ENSMUST00000175555 104 ntBASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Smg1Q8BKX6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smg1Q8BKX6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms