Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.84■□□□□ 0.29
Nop53Q8BK35 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nop53Q8BK35 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Nop53Q8BK35 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Gm42790-201ENSMUST00000201268 969 ntBASIC16.83■□□□□ 0.28
Nop53Q8BK35 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Nop53Q8BK35 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.82■□□□□ 0.28
Nop53Q8BK35 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.82■□□□□ 0.28
Nop53Q8BK35 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nop53Q8BK35 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nop53Q8BK35 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.82■□□□□ 0.28
Nop53Q8BK35 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop53Q8BK35 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop53Q8BK35 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Nop53Q8BK35 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms