Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh20Q8BIZ0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Gm15794-201ENSMUST00000120182 631 ntBASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.33■□□□□ 0.04
Pcdh20Q8BIZ0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh20Q8BIZ0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh20Q8BIZ0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms