Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf38Q8BI21 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rnf38Q8BI21 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Gm6659-201ENSMUST00000174752 547 ntBASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Mir6404-201ENSMUST00000183699 94 ntBASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf38Q8BI21 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms