Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim23Q8BGX0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim23Q8BGX0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Gm18733-201ENSMUST00000173950 856 ntBASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms