Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Gm44454-201ENSMUST00000198541 138 ntBASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc116Q80X53 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gm7284-201ENSMUST00000131667 944 ntBASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Rprl3-201ENSMUST00000157400 290 ntBASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gm7367-201ENSMUST00000057611 492 ntBASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc116Q80X53 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc116Q80X53 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ccdc116Q80X53 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc116Q80X53 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc116Q80X53 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Gm33142-201ENSMUST00000193913 867 ntBASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms