Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ush1gQ80T11 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.11■□□□□ 0.33
Ush1gQ80T11 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Gm18622-201ENSMUST00000219361 595 ntBASIC17.11■□□□□ 0.33
Ush1gQ80T11 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Gm11025-201ENSMUST00000140773 466 ntBASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.1■□□□□ 0.33
Ush1gQ80T11 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ush1gQ80T11 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Auts2-212ENSMUST00000178555 309 ntBASIC17.09■□□□□ 0.33
Ush1gQ80T11 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.09■□□□□ 0.33
Ush1gQ80T11 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ush1gQ80T11 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.08■□□□□ 0.33
Ush1gQ80T11 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.08■□□□□ 0.33
Ush1gQ80T11 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.08■□□□□ 0.32
Ush1gQ80T11 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms