Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx55Q6ZPL9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
Ddx55Q6ZPL9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Gm10154-201ENSMUST00000084445 354 ntBASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx55Q6ZPL9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm12428-201ENSMUST00000119844 727 ntBASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.75■□□□□ 0.43
Ddx55Q6ZPL9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms