Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gm2756-201ENSMUST00000195851 400 ntBASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx58Q6Q899 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx58Q6Q899 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Gm25911-201ENSMUST00000157621 56 ntBASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Gm27702-201ENSMUST00000184512 56 ntBASIC19.33■□□□□ 0.68
Ddx58Q6Q899 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.33■□□□□ 0.68
Ddx58Q6Q899 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.32■□□□□ 0.68
Ddx58Q6Q899 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx58Q6Q899 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Gm6736-201ENSMUST00000166583 948 ntBASIC19.31■□□□□ 0.68
Ddx58Q6Q899 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx58Q6Q899 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx58Q6Q899 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms