Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtl3Q6P1Y1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm25990-201ENSMUST00000102440 86 ntBASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtl3Q6P1Y1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Gm12350-201ENSMUST00000121208 462 ntBASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Gm11780-201ENSMUST00000136880 516 ntBASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Gm10060-201ENSMUST00000212002 111 ntBASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtl3Q6P1Y1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms