Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Six2Q62232 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.68■□□□□ 0.26
Six2Q62232 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Six2Q62232 Gm18669-201ENSMUST00000216049 778 ntBASIC16.68■□□□□ 0.26
Six2Q62232 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.68■□□□□ 0.26
Six2Q62232 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Six2Q62232 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six2Q62232 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.68■□□□□ 0.26
Six2Q62232 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.68■□□□□ 0.26
Six2Q62232 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Six2Q62232 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.67■□□□□ 0.26
Six2Q62232 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.67■□□□□ 0.26
Six2Q62232 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.67■□□□□ 0.26
Six2Q62232 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six2Q62232 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Grk6-207ENSMUST00000225925 2769 ntBASIC16.66■□□□□ 0.26
Six2Q62232 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Six2Q62232 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Gm12644-201ENSMUST00000119935 606 ntBASIC16.66■□□□□ 0.26
Six2Q62232 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Six2Q62232 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.66■□□□□ 0.26
Six2Q62232 Gm19164-201ENSMUST00000210667 640 ntBASIC16.66■□□□□ 0.26
Six2Q62232 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.66■□□□□ 0.26
Six2Q62232 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Six2Q62232 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Six2Q62232 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Six2Q62232 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six2Q62232 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Six2Q62232 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.65■□□□□ 0.26
Six2Q62232 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.65■□□□□ 0.26
Six2Q62232 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.65■□□□□ 0.26
Six2Q62232 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.65■□□□□ 0.26
Six2Q62232 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms