Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Gm45925-201ENSMUST00000218882 744 ntBASIC11.54□□□□□ -0.56
Foxc1Q61572 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Foxc1Q61572 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Gm5244-202ENSMUST00000189517 743 ntBASIC11.53□□□□□ -0.56
Foxc1Q61572 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Gm5864-201ENSMUST00000202263 970 ntBASIC11.53□□□□□ -0.56
Foxc1Q61572 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.53□□□□□ -0.56
Foxc1Q61572 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.53□□□□□ -0.56
Foxc1Q61572 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.53□□□□□ -0.56
Foxc1Q61572 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.53□□□□□ -0.56
Foxc1Q61572 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Foxc1Q61572 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Foxc1Q61572 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Foxc1Q61572 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Foxc1Q61572 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Foxc1Q61572 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Foxc1Q61572 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Foxc1Q61572 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Foxc1Q61572 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Foxc1Q61572 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.52□□□□□ -0.57
Foxc1Q61572 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.52□□□□□ -0.57
Foxc1Q61572 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.52□□□□□ -0.57
Foxc1Q61572 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.52□□□□□ -0.57
Foxc1Q61572 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.52□□□□□ -0.57
Foxc1Q61572 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Foxc1Q61572 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Foxc1Q61572 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.52□□□□□ -0.57
Foxc1Q61572 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.51□□□□□ -0.57
Foxc1Q61572 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.51□□□□□ -0.57
Foxc1Q61572 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm12895-201ENSMUST00000122214 226 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms