Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm17968-201ENSMUST00000194902 784 ntBASIC17.98■□□□□ 0.47
Scnn1aQ61180 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Scnn1aQ61180 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scnn1aQ61180 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Gm18246-201ENSMUST00000221023 728 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.97■□□□□ 0.47
Scnn1aQ61180 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scnn1aQ61180 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm17271-201ENSMUST00000165535 355 ntBASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.96■□□□□ 0.47
Scnn1aQ61180 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scnn1aQ61180 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scnn1aQ61180 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Gm5177-201ENSMUST00000183092 997 ntBASIC17.95■□□□□ 0.46
Scnn1aQ61180 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Gm44492-201ENSMUST00000197012 141 ntBASIC17.95■□□□□ 0.46
Scnn1aQ61180 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.95■□□□□ 0.46
Scnn1aQ61180 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scnn1aQ61180 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms