Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.47■□□□□ 0.71
Irf9Q61179 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.47■□□□□ 0.71
Irf9Q61179 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.47■□□□□ 0.71
Irf9Q61179 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.47■□□□□ 0.71
Irf9Q61179 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.47■□□□□ 0.71
Irf9Q61179 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Irf9Q61179 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Mir3113-201ENSMUST00000175478 76 ntBASIC19.46■□□□□ 0.71
Irf9Q61179 Mir8117-201ENSMUST00000184773 107 ntBASIC19.46■□□□□ 0.71
Irf9Q61179 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.46■□□□□ 0.71
Irf9Q61179 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Irf9Q61179 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Irf9Q61179 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Irf9Q61179 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irf9Q61179 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Gm13597-201ENSMUST00000121239 375 ntBASIC19.45■□□□□ 0.7
Irf9Q61179 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.45■□□□□ 0.7
Irf9Q61179 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.45■□□□□ 0.7
Irf9Q61179 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Irf9Q61179 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.45■□□□□ 0.7
Irf9Q61179 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.45■□□□□ 0.7
Irf9Q61179 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf9Q61179 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.44■□□□□ 0.7
Irf9Q61179 Gm25911-201ENSMUST00000157621 56 ntBASIC19.44■□□□□ 0.7
Irf9Q61179 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.44■□□□□ 0.7
Irf9Q61179 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.44■□□□□ 0.7
Irf9Q61179 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.44■□□□□ 0.7
Irf9Q61179 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.44■□□□□ 0.7
Irf9Q61179 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.44■□□□□ 0.7
Irf9Q61179 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Irf9Q61179 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Irf9Q61179 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf9Q61179 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.44■□□□□ 0.7
Irf9Q61179 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Irf9Q61179 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.43■□□□□ 0.7
Irf9Q61179 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.43■□□□□ 0.7
Irf9Q61179 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Irf9Q61179 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Gm14722-201ENSMUST00000118943 689 ntBASIC19.43■□□□□ 0.7
Irf9Q61179 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Irf9Q61179 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.43■□□□□ 0.7
Irf9Q61179 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf9Q61179 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.42■□□□□ 0.7
Irf9Q61179 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms