Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Foxd3Q61060 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxd3Q61060 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Gm24589-201ENSMUST00000116692 94 ntBASIC14.41□□□□□ -0.1
Foxd3Q61060 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Foxd3Q61060 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd3Q61060 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Gm11950-201ENSMUST00000121615 838 ntBASIC14.4□□□□□ -0.1
Foxd3Q61060 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Mir3081-201ENSMUST00000175305 84 ntBASIC14.4□□□□□ -0.1
Foxd3Q61060 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.4□□□□□ -0.1
Foxd3Q61060 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.4□□□□□ -0.1
Foxd3Q61060 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd3Q61060 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Foxd3Q61060 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.39□□□□□ -0.11
Foxd3Q61060 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.39□□□□□ -0.11
Foxd3Q61060 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.39□□□□□ -0.11
Foxd3Q61060 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Foxd3Q61060 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd3Q61060 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxd3Q61060 Gm10052-201ENSMUST00000168019 960 ntBASIC14.38□□□□□ -0.11
Foxd3Q61060 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd3Q61060 Gm7729-201ENSMUST00000050143 801 ntBASIC14.38□□□□□ -0.11
Foxd3Q61060 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Foxd3Q61060 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms