Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.04■□□□□ -0
ClpbQ60649 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
ClpbQ60649 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.04■□□□□ -0
ClpbQ60649 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Gm27867-201ENSMUST00000184778 125 ntBASIC15.04■□□□□ -0
ClpbQ60649 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ClpbQ60649 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.04■□□□□ -0
ClpbQ60649 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.04■□□□□ -0
ClpbQ60649 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.04■□□□□ -0
ClpbQ60649 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.04■□□□□ -0
ClpbQ60649 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClpbQ60649 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.04■□□□□ -0
ClpbQ60649 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.03■□□□□ -0
ClpbQ60649 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.03■□□□□ -0
ClpbQ60649 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.03■□□□□ -0
ClpbQ60649 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
ClpbQ60649 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
ClpbQ60649 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
ClpbQ60649 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.03■□□□□ -0
ClpbQ60649 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.03■□□□□ -0
ClpbQ60649 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.03■□□□□ -0
ClpbQ60649 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.03■□□□□ -0
ClpbQ60649 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.03■□□□□ -0
ClpbQ60649 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.03■□□□□ -0
ClpbQ60649 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.03■□□□□ -0
ClpbQ60649 Mir8098-201ENSMUST00000184011 137 ntBASIC15.03■□□□□ -0
ClpbQ60649 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.03■□□□□ -0
ClpbQ60649 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ClpbQ60649 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ClpbQ60649 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClpbQ60649 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
ClpbQ60649 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
ClpbQ60649 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ClpbQ60649 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.02■□□□□ -0
ClpbQ60649 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ClpbQ60649 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.02■□□□□ -0
ClpbQ60649 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.02■□□□□ -0
ClpbQ60649 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.02■□□□□ -0
ClpbQ60649 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClpbQ60649 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.02□□□□□ -0.01
ClpbQ60649 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
ClpbQ60649 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClpbQ60649 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ClpbQ60649 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
ClpbQ60649 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.01□□□□□ -0.01
ClpbQ60649 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ClpbQ60649 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClpbQ60649 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms