Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom1Q5SX79 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shroom1Q5SX79 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.63■□□□□ 0.25
Shroom1Q5SX79 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm27702-201ENSMUST00000184512 56 ntBASIC16.62■□□□□ 0.25
Shroom1Q5SX79 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms