Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm9870-201ENSMUST00000063874 645 ntBASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-1Q5R1I8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3-1Q5R1I8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-1Q5R1I8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms