Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8d-1Q5R1H8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8d-1Q5R1H8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms