Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim58Q5NCC9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim58Q5NCC9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim58Q5NCC9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim58Q5NCC9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim58Q5NCC9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.83■□□□□ 0.76
Trim58Q5NCC9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim58Q5NCC9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Gm14859-201ENSMUST00000117752 357 ntBASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Gm12895-201ENSMUST00000122214 226 ntBASIC19.82■□□□□ 0.76
Trim58Q5NCC9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Gm7506-201ENSMUST00000207758 815 ntBASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim58Q5NCC9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm4459-201ENSMUST00000118750 468 ntBASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm12497-201ENSMUST00000138778 237 ntBASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm18622-201ENSMUST00000219361 595 ntBASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim58Q5NCC9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim58Q5NCC9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim58Q5NCC9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms