Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Haglr-201ENSMUST00000100000 2085 ntBASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps13aQ5H8C4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Mir3547-201ENSMUST00000175461 88 ntBASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps13aQ5H8C4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Vps13aQ5H8C4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Vps13aQ5H8C4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm12859-201ENSMUST00000117834 427 ntBASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm6973-201ENSMUST00000117080 721 ntBASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Gm18827-201ENSMUST00000188341 790 ntBASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps13aQ5H8C4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gm29667-201ENSMUST00000190817 490 ntBASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gm27838-201ENSMUST00000184829 128 ntBASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps13aQ5H8C4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps13aQ5H8C4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps13aQ5H8C4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Vps13aQ5H8C4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps13aQ5H8C4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms